Ermis won their 3rd title.
Fourteen teams participated in the 2008–09 Cypriot Second Division.
The team with the most points at the end of the season crowned champions.
The first three teams were promoted to 2009–10 Cypriot First Division and the last three teams were relegated to the 2009–10 Cypriot Third Division.
Teams promoted to 2008–09 Cypriot First Division Teams relegated from 2007–08 Cypriot First Division Teams promoted from 2007–08 Cypriot Third Division Teams relegated to 2008–09 Cypriot Third Division