The main areas covered are: The range of topics covered in these areas is extensive, from Molecular Interaction and Reactivity to Spectroscopy and Thermodynamics of Clusters, from Atomic Optics to Bose-Einstein Condensation to Femtochemistry.

The EPJ D arose from various predecessors: Il Nuovo Cimento (Section D), Journal de Physique, and Zeitschrift für Physik D. Prior to 1998, this journal was named Zeitschrift für Physik D: Atoms, Molecules and Clusters.

In January 2004, Arecchi stepped down and Franco A. Gianturco took over his position.

In 2009, the newly appointed (third) editor-in-chief, Kurt Becker, took on the responsibility for promoting the plasma physics coverage of the journal.

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