[1][2][3] Charles Darwin was the first to describe the role of natural selection in speciation in his 1859 book On the Origin of Species.
[5] Rapid sympatric speciation can take place through polyploidy, such as by doubling of chromosome number; the result is progeny which are immediately reproductively isolated from the parent population.
Why is not all nature in confusion instead of the species being, as we see them, well defined?This dilemma can be described as the absence or rarity of transitional varieties in habitat space.
Darwin pointed out that by the theory of natural selection "innumerable transitional forms must have existed", and wondered "why do we not find them embedded in countless numbers in the crust of the earth".
[7] It has been argued that the resolution of Darwin's first dilemma lies in the fact that out-crossing sexual reproduction has an intrinsic cost of rarity.
[16][17] Sexual populations therefore rapidly shed rare or peripheral phenotypic features, thus canalizing the entire external appearance, as illustrated in the accompanying image of the African pygmy kingfisher, Ispidina picta.
[18] Thus, the avoidance of mates displaying rare and unusual phenotypic features inevitably leads to reproductive isolation, one of the hallmarks of speciation.
Thus, asexual organisms very frequently show the continuous variation in form (often in many different directions) that Darwin expected evolution to produce, making their classification into "species" (more correctly, morphospecies) very difficult.
[10][16][17][23][24][25] All forms of natural speciation have taken place over the course of evolution; however, debate persists as to the relative importance of each mechanism in driving biodiversity.
[citation needed] In parapatric speciation, there is only partial separation of the zones of two diverging populations afforded by geography; individuals of each species may come in contact or cross habitats from time to time, but reduced fitness of the heterozygote leads to selection for behaviours or mechanisms that prevent their interbreeding.
[42] Sympatric speciation driven by ecological factors may also account for the extraordinary diversity of crustaceans living in the depths of Siberia's Lake Baikal.
If the hybrids are infertile, or fertile but less fit than their ancestors, then there will be further reproductive isolation and speciation has essentially occurred, as in horses and donkeys.
[citation needed] Another important theoretical mechanism is the arise of intrinsic genetic incompatibilities, addressed in the Bateson-Dobzhansky-Muller model.
[49] Genes from allopatric populations will have different evolutionary backgrounds and are never tested together until hybridization at secondary contact, when negative epistatic interactions will be exposed.
[52] There is a large amount of evidence supporting this theory, primarily from laboratory populations such as Drosophila and Mus, and some genes involved in incompatibilities have been identified.
[53] Natural selection is inherently involved in the process of speciation, whereby, "under ecological speciation, populations in different environments, or populations exploiting different resources, experience contrasting natural selection pressures on the traits that directly or indirectly bring about the evolution of reproductive isolation".
[57][58][59][60] In the second sense, "speciation" refers to the wide-spread tendency of sexual creatures to be grouped into clearly defined species,[61][20] rather than forming a continuum of phenotypes both in time and space – which would be the more obvious or logical consequence of natural selection.
William R. Rice and George W. Salt bred Drosophila melanogaster fruit flies using a maze with three different choices of habitat such as light/dark and wet/dry.
[72] An alternative explanation is that these observations are consistent with sexually-reproducing animals being inherently reluctant to mate with individuals whose appearance or behavior is different from the norm.
Thus, if an animal, unable to predict natural selection's future direction, is conditioned to produce the fittest offspring possible, it will avoid mates with unusual habits or features.
The order of speciation of three groups from a common ancestor may be unclear or unknown; a collection of three such species is referred to as a "trichotomy".
[citation needed] Polyploidy is a mechanism that has caused many rapid speciation events in sympatry because offspring of, for example, tetraploid x diploid matings often result in triploid sterile progeny.
[citation needed] It has been suggested that many of the existing plant and most animal species have undergone an event of polyploidization in their evolutionary history.
Eventually a competing theory involving the gradual accumulation of mutations was shown to occur in nature so often that geneticists largely dismissed the moving gene hypothesis.
While some evolutionary biologists claim that speciation events have remained relatively constant and gradual over time (known as "Phyletic gradualism" – see diagram), some palaeontologists such as Niles Eldredge and Stephen Jay Gould[87] have argued that species usually remain unchanged over long stretches of time, and that speciation occurs only over relatively brief intervals, a view known as punctuated equilibrium.
[citation needed] Evolution can be extremely rapid, as shown in the creation of domesticated animals and plants in a very short geological space of time, spanning only a few tens of thousands of years.
The resolution to Darwin's second dilemma might thus come about as follows: If sexual individuals are disadvantaged by passing mutations on to their offspring, they will avoid mutant mates with strange or unusual characteristics.
These occur most commonly on small islands, in remote valleys, lakes, river systems, or caves,[101] or during the aftermath of a mass extinction.
[87][100][102] Graphically, these fossil species are represented by lines parallel with the time axis, whose lengths depict how long each of them existed.
The fact that the lines remain parallel with the time axis illustrates the unchanging appearance of each of the fossil species depicted on the graph.