This list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequence alignment.
See structural alignment software for structural alignment of proteins.
*Sequence type: protein or nucleotide *Sequence type: protein or nucleotide **Alignment type: local or global *Sequence type: protein or nucleotide.
**Alignment type: local or global *Sequence type: protein or nucleotide *Sequence type: protein or nucleotide Please see List of alignment visualization software.
[51] [52]