In the 2002–03 season, the club was promoted to Liga Bet for the second time, after they won their regional division of Liga Gimel with a perfect record of 20 wins, without any draw or lose, scoring 110 goals and conceding 11.

After three seasons in Liga Bet South B division, the club finished the 2005–06 season in the third place, and were eventually promoted to Liga Alef, after one spot was vacated in the south division, following the merger of Beitar Kiryat Gat and Maccabi Kiryat Gat.

In Liga Alef South division, the highest placing of the club was runners-up finish in the 2010–11 season, and qualification with the home advantage to the promotion play-offs, where they beat Hapoel Kfar Shalem 2–0 in the first round, and were eliminated in the second round after they lost 1–3 to Maccabi Kabilio Jaffa.

Prior to the 2014–15 season, Maccabi were deducted nine points for entering administration.

[1] The club did not recover, as at the end of the season, they were relegated to Liga Bet, following a bottom place finish.