The crew escaped before the ship's destruction thanks to Neo's newfound ability to identify and assume limited control over Sentinel hardware using his powers as the chosen one.
[4] The Matrix and Philosophy states that the Nebuchadnezzar's name is symbolically important, as the ancient king "has a dream he can't remember but keeps searching for an answer."
11", which alludes to the Bible verse Mark 3:11: "And, whenever the evil spirits saw him, they fell down before him and cried out, 'You are the Son of God,'" relating Neo's path to the Jesus story.
[5] Transpersonal Management: Lessons from the Matrix Trilogy states that the name Nebuchadnezzar represents the machines' arrogance in claiming godliness, similar to the ancient king, as well as the fact that the rebels are warriors who are attempting to liberate their people.
[6] Neuroscience in Science Fiction Films calls the name symbolic of the fact that "imminent doom awaits" due to the apocalyptic nature of the Book of Daniel.