Slippery sequence

A slippery sequence is a small section of codon nucleotide sequences (usually UUUAAAC) that controls the rate and chance of ribosomal frameshifting.

This allows a tRNA to shift by 1 base (−1) after it has paired with its anticodon, changing the reading frame.

[1] The frameshift occurs due to wobble pairing.

The Gibbs free energy of secondary structures downstream give a hint at how often frameshift happens.

[7] Tension on the mRNA molecule also plays a role.

Tandem slippage of 2 tRNAs at rous sarcoma virus slippery sequence. After the frameshift, new base pairings are correct at the first and second nucleotides but incorrect at wobble position. E , P , and A sites of the ribosome are indicated. Location of growing polypeptide chain is not indicated in image because there is not yet consensus on whether the −1 slip occurs before or after polypeptide is transferred from P-site tRNA to A-site tRNA (in this case from the Asn tRNA to the Leu tRNA). [ 1 ]