He is the defensive coordinator and safeties coach for the University of South Alabama, positions he has held since 2024.
During the 2017 season, he helped the defense hold 10-of-13 opponents to 14 points or less along with being a part of the staff advancing to the 2018 College Football Playoff National Championship.
[6] On January 30, 2018, Windham was named as the inside linebackers coach for the Kent State Golden Flashes.
[10] On January 24, 2024, Windham would be named as the linebackers coach for the Arkansas State Red Wolves.
[3] However, two days later on January 26, he was brought back by South Alabama and was promoted as the defensive coordinator and safeties coach.