2009–10 Bosnia and Herzegovina Football Cup was the fifteenth season of Bosnia and Herzegovina's annual football cup, and a tenth season of the unified competition.
The competition started on 8 September 2009 with the first round and concluded on 19 May 2010 with the final.
Thirty-two teams entered in the first round.
Željezničar 3–3 Borac on aggregate.
Borac won on away goals.