APOBEC1

This holoenzyme is involved in the editing of cytosine-to-uracil (C-to-U) nucleotide bases in apolipoprotein B and neurofibromin 1 mRNAs.

[6] Its function relies on introducing a stop codon into apolipoprotein B (ApoB) mRNA, which alters lipid metabolism in the gastrointestinal tract.

A1’s deamination of the cytosine base yields uracil, which creates a stop codon in the mRNA.A1 has been linked with both positive and negative health effects.

[12] The editing amount, or expression, of A1 performs is correlated with the insulin concentration in the nucleus, the site of modification.

[13][14] Tests involving A1 mutants with various deleted amino acid sequences have shown that editing activity is dependent on residues 14 to 35.

Like all APOBEC proteins, A1 coordinates a zinc atom with two cysteine and one histidine residues that serve as a Lewis acid.

Its diffusion toward the nucleic membrane can lead it to mutate DNA sequences that are actively transcribed on the genome.

[19] A pan-cancer study shows that A1 mRNA level is associated with adverse prognosis as well as higher rate of the human genomic insertions and deletions (indels), particularly in-frame ones, which proposes its endogenous mutator activity.

The overall deamination of cytidine to form uridine.
These residues (Leu-182 to Pro-191) are necessary for dimerization of APOBEC1, which is necessary to form the correct enzyme complex with ACF. During experimentation, substituted leucine and isoleucine residues significantly reduced the deamination of cytosine.
Possible mechanism for C-to-U modification using Zinc complex with H-66, Cys-93, and Cys-96.
APOBEC1 catalytic active site, residue regionResidues 59-70, 82-95Linking glycine represents residues 71-81, which are not related to activation