The club qualified for the 1996 UEFA Intertoto Cup and played Charleroi (Belgium) and SV Ried (Austria) at the Racecourse Ground, Wrexham, and travelled to Zaglebie Lubin (Poland) and Silkeborg (Denmark).

Despite not progressing past the group stage, the club gave a good account of itself especially with a 0–0 draw against Charleroi and losing to a late goal against SV Ried.

Conwy United also won the Fairplay League and young star Toby Jones picked up the top goalscorer award with a forty plus tally in all competitions which earned the youngster a move to full-time at Neath.

In the 2011–12 season, Conwy got off to a flying start in the second tier of Welsh football winning their first four games under new management Steve Jones and Dean Martin.

former chairman Geoff Cartwright appointed Mick McGrath as manager who signed a number of key players the team needed including Dean Canning, John Owen and Eddie Jebb (on-loan from Bangor City).

In April 2012 the Football Association of Wales domestic committee approved a name change request that from the 2012–13 season the club was to be renamed Conwy Borough F.C.

Chris Herbert and John Keegan left their posts in December 2013 and were replaced by players Darren Moss and Aden Shannon until the end of the season who guided the side to a second-placed finish.

Shannon was placed in permanent charge of the Tangerines for the 2015–16 season but history was to repeat itself when, after a poor start and with the club languishing in the relegation zone, was relieved of his duties and was eventually replaced by Jason Aldcroft and former TNS defender Tommy Holmes.

August 2017 saw the introduction of new directors to the Executive board – local businessman Luke Blundell, solicitor Chris Wilton & existing committee member Craig Crossfield.

[6] Gareth Thomas departed from his role as team manager in December 2018 having been success during his first season, winning the Welsh Alliance Division One title, in addition to the FAW Trophy and Cookson Cup in a memorable treble-winning campaign.