It is considered the onshore continuation of the Swan Islands Transform Fault and Cayman trench, which run under the Caribbean Sea.
[1] Its western end appears not to continue further than its surface trace,[2] where it is covered by Cenozoic volcanics.
Motion of the fault and others in the plate boundary have formed north–south trending grabens across the region that show evidence of counter-clockwise rotation over time.
[1] Studies of GPS displacement of the zone reveal that the motion of the North American / Caribbean plate Boundary is, for the most part, accommodated by the Motagua Fault.
[4] The event caused 2 meters of vertical displacement and ruptured 230 km of the fault's length.