Microscale thermophoresis is based on the detection of a temperature-induced change in fluorescence of a target as a function of the concentration of a non-fluorescent ligand.
On the one hand it is based on a temperature related intensity change (TRIC) of the fluorescent probe, which can be affected by binding events.
The fluorescence of a target molecule can be extrinsic or intrinsic (aromatic amino acids) and is altered in temperature gradients due to two distinct effects.
[11][12] On the other hand, MST is also based on the directed movement of molecules along temperature gradients, an effect termed thermophoresis.
The temperature of the aqueous solution in the laser spot is raised by ΔT=1-10 K. Before the IR-Laser is switched on a homogeneous fluorescence distribution Fcold is observed inside the capillary.
The thermal relaxation induces a binding-dependent drop in the fluorescence of the dye due to its local environmental-dependent response to the temperature jump (TRIC).
This binding curve can directly be fitted with the nonlinear solution of the law of mass action, with the dissociation constant KD as result.