Diphosphomevalonate decarboxylase

Diphosphomevalonate decarboxylase (EC 4.1.1.33), most commonly referred to in scientific literature as mevalonate diphosphate decarboxylase[citation needed], is an enzyme that catalyzes the chemical reaction This enzyme converts mevalonate 5-diphosphate (MVAPP) to isopentenyl diphosphate (IPP) through ATP dependent decarboxylation.

An aspartic acid residue deprotonates the C3 hydroxyl on MVAPP and facilitates the oxygen to attack a phosphate from ATP.

Though there is limited information, some important residues have been identified and are highlighted in the active site structure and mechanism.

[1] Asp-305 is positioned about 4 Å from the C3 hydroxyl on MVAPP and acts as a general base catalyst in the active site.

[1] Mevalonate diphosphate decarboxylase also has a phosphate-binding loop (‘P-loop’) where amino acid residues provide key interactions that stabilize the nucleotide triphosphoryl moiety.

[10] The main point of regulation in cholesterol and nonsterol isoprene biosynethsis is HMGCoA reductase, the third enzyme in the mevalonate pathway.

[12] Hypercholesterolemia or high cholesterol is considered a major risk factor in coronary artery disease.

[14][15] In humans, it is hypothesized that cholesterol deficiency may make the plasma membranes fragile and, as a result, induce angionecrosis in the brain.

Reduced serum cholesterol, resulting from a low activity of mevalonate diphosphate decarboxylase, may be the cause of cerebral hemorrhage in some cases.

Proposed mechanism for human mevalonate diphosphate decarboxylase. Amino acid residues colored to correspond to crystal structure image of active site residues. ATP is brown to show phosphoryl transfer. [ 1 ]
Crystal structure of the active cite of human mevalonate diphosphate decarboxylase, generated from 3D4J. Proposed important residues for mechanism and substrate binding are highlighted: Arg-161 (green), Ser-127 (blue), Asp-305 (orange), and Asn-17 (red). Sulfate ion aided in better understanding the substrate binding. Mevalonate diphosphate is proposed to be positioned so the terminal phosphate is near the sulfate ion in the crystal structure. [ 1 ]